熊静桦 (Jinghua Xiong)

[EDUCATION]
  • Sept 2022 - present：Institute of Neuroscience, Master of Neuroscience.
  • Sept 2019 - Jun 2021：Sun Yat-sen University, Second Degree of Applied Mathematics.
  • Sept 2015 - Jun 2019：Sun Yat-sen University, Bachelor of Bioengineering.
[EXPERTISE]
    Computational and Cognitive Neuroscience, Neuroimaging, Statistics, Machine Learning

RESEARCH

DeepCells: Inferring gene regulatory relationships by using single RNA sequencing data(2021)

Jinghua Xiong, Guided by Professor Jiajun Zhang.

Thesis of Applied Mathematics

Abstract: Inference of causal relationships in genes by feature engineering in single cell RNA sequencing data.

Link | Code

ColorCells: a database of expression, classification and functions of lncRNAs in single cells(2021)

Ling-Ling Zheng, Jing-Hua Xiong, Wu-Jian Zheng, Jun-Hao Wang, Zi-Liang Huang, Zhi-Rong Chen, Xin-Yao Sun.

Briefings in Bioinformatics, Volume 22, Issue 4, July 2021

Abstract: lncRNAs database for single cell RNA sequencing.

Link | Code

Large scale single cell rnaseq based on deep learning Data cell typing method(2019)

Jinghua Xiong, Guided by Professor Lingling Zheng.

Thesis of Bioengineering

Abstract: Deep learning algorithms for cell typing using single cell RNA sequencing.

Link | Code

S-DIn: Search engine and Design platform for Inspiration with Network analysis(2017)

Tianqin Li, Shucheng Zheng, Yimin Zheng, Yadi Guo, Xiang Li, Xingyu Fu, Ziwei Wang, Jiawei Zhang, Wei Dai, Jinran Lin, Xiaoxi Wang, Jinghua Xiong, Ruijie Wang, Mingqi Xue, Taoli Zhou, Peixin Cai, Yuyun Liang, Yanrong Lv, Haochen Ni, Jingyi Guan, MengZhi Lai, Ziqi Kang, Zheng Li, Jingyi Guan. (iGEM 2017 Best Software Project)

Abstract: An integrated Search Engine and Design Platform, developed specifically for Synthetic Biology.

Link | Code